Cleanup directory structure of the binary programs

Instead of having the binary programs in randomly named subdirectories,
move all of them to a "bin" subdirectory, similar to the utility
libraries that have subdirectories within "lib" and give the
subdirectories the propper names (e.g. have gensquashfs source in a
directory *actually* named "gensquashfs").

Signed-off-by: David Oberhollenzer <david.oberhollenzer@sigma-star.at>

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